PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY25339.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 421aa MW: 46486.6 Da PI: 5.0087

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY25339.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.3	0.00024	10	32	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C +C+ks+ + +L H+r+H TEY25339.1 10 YVCRICSKSCVSGKSLGGHMRVH 32 9********************99 PP
2	zf-C2H2	10.9	0.0014	111	130	2	21
EETTTTEEESSHHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHir 21 +C Cgk F + L H+r TEY25339.1 111 SCRECGKEFASLRALSGHMR 130 6******************8 PP
3	zf-C2H2	12	0.00062	141	163	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cg+ F + + H+++H TEY25339.1 141 HSCKECGRGFDSMRAMFGHMKSH 163 79*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 421 aa Download sequence
MGEVEEEQRY VCRICSKSCV SGKSLGGHMR VHLSQIAASK KAAAQEKLVG IKMVCDDEDD 60 DDDHQLNQSI SEEVEELGDG GDQSNASYEL RENPKKSWRI SDPKHAKAAN SCRECGKEFA 120 SLRALSGHMR CHSIKNKKEV HSCKECGRGF DSMRAMFGHM KSHSTKRGMV KVPSVVESGE 180 SLSDFCPIRR KRSRIKYKGT VNVDVSHCGV SDLEEAEEAA RCLVMLSRGV GSFFKLDSNA 240 EDSDDDSAYF GGVVANASYV EKNVSEFDDD DDEMLRVEKG MKVDLVCDDE FLEHGIGSSN 300 GSDDGDDESC FENENLELIE GFEEKKHSEG RLLLCADSNH DRCGGEMESS KGKERECPIC 360 FKVFASGQAL GGHKRAHYNG VVEGKNREML DLNFPVPADS GSLSSWFAER SRGHEAMLLT 420 T

Sequence ? help Back to Top

Protein Sequence Length: 421 aa Download sequence

MGEVEEEQRY VCRICSKSCV SGKSLGGHMR VHLSQIAASK KAAAQEKLVG IKMVCDDEDD  60
DDDHQLNQSI SEEVEELGDG GDQSNASYEL RENPKKSWRI SDPKHAKAAN SCRECGKEFA  120
SLRALSGHMR CHSIKNKKEV HSCKECGRGF DSMRAMFGHM KSHSTKRGMV KVPSVVESGE  180
SLSDFCPIRR KRSRIKYKGT VNVDVSHCGV SDLEEAEEAA RCLVMLSRGV GSFFKLDSNA  240
EDSDDDSAYF GGVVANASYV EKNVSEFDDD DDEMLRVEKG MKVDLVCDDE FLEHGIGSSN  300
GSDDGDDESC FENENLELIE GFEEKKHSEG RLLLCADSNH DRCGGEMESS KGKERECPIC  360
FKVFASGQAL GGHKRAHYNG VVEGKNREML DLNFPVPADS GSLSSWFAER SRGHEAMLLT  420
T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26610.1	2e-15	C2H2 family protein