PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY24727.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

FAR1

Protein Properties

Length: 560aa MW: 62782 Da PI: 6.7982

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY24727.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	55.4	2e-17	108	193	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fYn+YA++vGF++rk+ sk+ + +t+ vCs+eg+++ + k+ +++r++++ ++ Ckak+ k ++v+++e+ HnH+++ TEY24727.1 108 FYNKYARQVGFDTRKHGSKRV--GDLVTWLYVVCSREGEKRVNYKQ-PETKRRHSSRKCLCKAKVAFKFCLGTGYVVKQFEERHNHDMV 193 9************999888..8889***********9999.888899999****************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 560 aa Download sequence
MNSSNSVTHI TEETSSSMDD SSNPSHTTEL SPEAGKTHGT TSTENIIDNH GSIFDELQSP 60 VGGSLFDSDS DSSEDEDLEP VSYIPECPSQ MKPHIGQVFQ TLDDATVFYN KYARQVGFDT 120 RKHGSKRVGD LVTWLYVVCS REGEKRVNYK QPETKRRHSS RKCLCKAKVA FKFCLGTGYV 180 VKQFEERHNH DMVHLRHKRF MRLNRNIDPV HQKFIADCAS ANIGPTLTFS LLSEVQSSLD 240 CPASTTFVRN ALKLLSDMHI TEGTVLKLQC PEAKCGDMIT PGLLKRLLGK EEFEHWESLM 300 LEKTLESMTD VVCCPRCETP CLEDKDDHAQ CSKCYYSFCT LEASLEHSLL AAQLEIEPEK 360 TSETPEKKPE EPKATDKQVP TSEAEKKLSK EKPSEDRQNS TSMKGEQRRR EAGMINQLLS 420 MKEINRFAKQ CPSCKMAISR TEGTLTVFCC ENNKEIQRWE AEMNGRQIVG QIQAQLFANH 480 GHSCPNCGGK QQSRFLLGIR AKIIIATCVG RWYDAVQSTM VPKAASNTRL DNRPYPLQSL 540 GCAEGGKQFT DLTIASVLHG

Sequence ? help Back to Top

Protein Sequence Length: 560 aa Download sequence

MNSSNSVTHI TEETSSSMDD SSNPSHTTEL SPEAGKTHGT TSTENIIDNH GSIFDELQSP  60
VGGSLFDSDS DSSEDEDLEP VSYIPECPSQ MKPHIGQVFQ TLDDATVFYN KYARQVGFDT  120
RKHGSKRVGD LVTWLYVVCS REGEKRVNYK QPETKRRHSS RKCLCKAKVA FKFCLGTGYV  180
VKQFEERHNH DMVHLRHKRF MRLNRNIDPV HQKFIADCAS ANIGPTLTFS LLSEVQSSLD  240
CPASTTFVRN ALKLLSDMHI TEGTVLKLQC PEAKCGDMIT PGLLKRLLGK EEFEHWESLM  300
LEKTLESMTD VVCCPRCETP CLEDKDDHAQ CSKCYYSFCT LEASLEHSLL AAQLEIEPEK  360
TSETPEKKPE EPKATDKQVP TSEAEKKLSK EKPSEDRQNS TSMKGEQRRR EAGMINQLLS  420
MKEINRFAKQ CPSCKMAISR TEGTLTVFCC ENNKEIQRWE AEMNGRQIVG QIQAQLFANH  480
GHSCPNCGGK QQSRFLLGIR AKIIIATCVG RWYDAVQSTM VPKAASNTRL DNRPYPLQSL  540
GCAEGGKQFT DLTIASVLHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	6e-12	FAR1 family protein