PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY24556.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | C2H2 | ||||||||
Protein Properties | Length: 195aa MW: 21280.2 Da PI: 8.4187 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.3 | 0.00051 | 66 | 88 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+k+Fs+ L H +H TEY24556.1 66 YQCKTCSKCFSSFQALGGHRASH 88 9***********99999998887 PP | |||||||
2 | zf-C2H2 | 11.4 | 0.001 | 118 | 140 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F + L H+r+H TEY24556.1 118 HECSICGAEFGSGQALGGHMRRH 140 78********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence |
MMLQEVSTMI KGKRSKRPRS TSPLSVISDV SPSHSAHDEE AEEDMANCLI LLAKGRSSPP 60 PAEDAYQCKT CSKCFSSFQA LGGHRASHKK PLMDDTTNLS LQISSCRSAS SPSKTRVHEC 120 SICGAEFGSG QALGGHMRRH RPIPANHGVK KQRNLLSLDL NLPAPEDDQP ESKFPFATKE 180 QVIVFAASPL IHCHY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03510.1 | 8e-50 | C2H2 family protein |