PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY23613.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

FAR1

Protein Properties

Length: 664aa MW: 76752.7 Da PI: 6.1552

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY23613.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	74.2	2.7e-23	58	143	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fYn YAk GF +r+s+s +++ +e +++++ Cs g++++++ + ++r+etrtgC a++ +k+ + ++w++ ++el+HnH+l+p TEY23613.1 58 DFYNVYAKGQGFGIRVSNSWFRSKRRERYRAKLSCSSAGFKKKSEAN-----NPRPETRTGCPAMVIIKLVDAQRWRIVEVELDHNHPLSP 143 6*******************99999***********99888.....9*********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 664 aa Download sequence
MELVSLNSEP VFGEGDEYED GDCSVAGNSD KPDSMQLERE FLLPMVGLEF DSFDEAYDFY 60 NVYAKGQGFG IRVSNSWFRS KRRERYRAKL SCSSAGFKKK SEANNPRPET RTGCPAMVII 120 KLVDAQRWRI VEVELDHNHP LSPESMRFYK SHKKMILAAK KALPSDPVRE VHTIKLYRTA 180 VVDGLCKADP RNERNTMDNS KHLILKEGDS LAAYNYFCRM KLTNPNFFYL VDLDDDGRLK 240 NLFWADARSR IAYNYFCDTI MIDTTSLTNK YEIPLICFAG INHHGESVLL GCGVLGDESV 300 ECFIWMFRTW LTCMQGKHPQ VIVTDQSKPL LIAVSEVFPQ ACHCYCLSYI MLRVPEKLGG 360 LNGFEVIKRR FSKAVFGSLT TSEFETFWGE MISQHNLREN KWLQLLYEDR QRWAPVYLKD 420 TSFFGMLPVS EGEGTTPFFD GYVHKHTSLK EFLDKYDMVL QRKYLKEAMG DVESRNLASE 480 LKTGSNFELQ LSKVYTKEMF EKCQIEVEGM YSCFNIKQVA KNGLILTFVV EEQQEAEANE 540 KEVRHYEVLY ETTQVEVRCI CGLFNFKGYL CRHALSVLSH NGVKEMPSQY ILRCWSKDYR 600 RKFLVDSAIS VDSPLQWHEN LIRHSLQVVE EGAQSEDHYE AMMQELNSLL TEISVMDKNY 660 MCNS

Sequence ? help Back to Top

Protein Sequence Length: 664 aa Download sequence

MELVSLNSEP VFGEGDEYED GDCSVAGNSD KPDSMQLERE FLLPMVGLEF DSFDEAYDFY  60
NVYAKGQGFG IRVSNSWFRS KRRERYRAKL SCSSAGFKKK SEANNPRPET RTGCPAMVII  120
KLVDAQRWRI VEVELDHNHP LSPESMRFYK SHKKMILAAK KALPSDPVRE VHTIKLYRTA  180
VVDGLCKADP RNERNTMDNS KHLILKEGDS LAAYNYFCRM KLTNPNFFYL VDLDDDGRLK  240
NLFWADARSR IAYNYFCDTI MIDTTSLTNK YEIPLICFAG INHHGESVLL GCGVLGDESV  300
ECFIWMFRTW LTCMQGKHPQ VIVTDQSKPL LIAVSEVFPQ ACHCYCLSYI MLRVPEKLGG  360
LNGFEVIKRR FSKAVFGSLT TSEFETFWGE MISQHNLREN KWLQLLYEDR QRWAPVYLKD  420
TSFFGMLPVS EGEGTTPFFD GYVHKHTSLK EFLDKYDMVL QRKYLKEAMG DVESRNLASE  480
LKTGSNFELQ LSKVYTKEMF EKCQIEVEGM YSCFNIKQVA KNGLILTFVV EEQQEAEANE  540
KEVRHYEVLY ETTQVEVRCI CGLFNFKGYL CRHALSVLSH NGVKEMPSQY ILRCWSKDYR  600
RKFLVDSAIS VDSPLQWHEN LIRHSLQVVE EGAQSEDHYE AMMQELNSLL TEISVMDKNY  660
MCNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	0.0	FAR1 family protein