PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY23601.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 484aa MW: 50892.3 Da PI: 8.1343

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY23601.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.6	4.5e-05	54	76	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k F r nL+ H r H TEY23601.1 54 FVCEVCKKGFQRDQNLQLHRRGH 76 89*******************88 PP
2	zf-C2H2	11.3	0.0011	130	152	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H + + TEY23601.1 130 WKCDKCSKKYAVQSDWKAHSKIC 152 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 484 aa Download sequence
MNDSTASGDV SSGNQATPPP KSIAKKKRNL PGMPDPDAEV IALSPKTLMA TNRFVCEVCK 60 KGFQRDQNLQ LHRRGHNLPW KLRQRSSKDV KKRVYVCPEP SCVHHEPSRA LGDLTGIKKH 120 FCRKHGEKKW KCDKCSKKYA VQSDWKAHSK ICGTKEYKCD CGTLFNRKDS FITHRAFCDA 180 LAEETSRPAS VSPPSPPSPA LSPPPPLPLP SEHEDSTQTD VVSLALPDNN NHGSFLNPDL 240 SFSVAFESWI LFFTEILESA KPDSTSGRVL EETPLMTNLT SGSSSNGSSS SNVFATLFAS 300 STSSGSFQSQ SAGFSNLFQA IACPDPMPAT APSSSSEPVA LGLAVNQGSS IFGTAGQDHV 360 QYPPAPPPSL SATALLQKAA QMGAAASNTS LLRGLGIVSS SSSPSVSHDG ASLASGLGLG 420 LACDSGSGLK ELMLGTPSIF GPKQTTLDLL GLGMAATGGS TSGLSVLMNG GLDVGRDFGG 480 QDIR

Sequence ? help Back to Top

Protein Sequence Length: 484 aa Download sequence

MNDSTASGDV SSGNQATPPP KSIAKKKRNL PGMPDPDAEV IALSPKTLMA TNRFVCEVCK  60
KGFQRDQNLQ LHRRGHNLPW KLRQRSSKDV KKRVYVCPEP SCVHHEPSRA LGDLTGIKKH  120
FCRKHGEKKW KCDKCSKKYA VQSDWKAHSK ICGTKEYKCD CGTLFNRKDS FITHRAFCDA  180
LAEETSRPAS VSPPSPPSPA LSPPPPLPLP SEHEDSTQTD VVSLALPDNN NHGSFLNPDL  240
SFSVAFESWI LFFTEILESA KPDSTSGRVL EETPLMTNLT SGSSSNGSSS SNVFATLFAS  300
STSSGSFQSQ SAGFSNLFQA IACPDPMPAT APSSSSEPVA LGLAVNQGSS IFGTAGQDHV  360
QYPPAPPPSL SATALLQKAA QMGAAASNTS LLRGLGIVSS SSSPSVSHDG ASLASGLGLG  420
LACDSGSGLK ELMLGTPSIF GPKQTTLDLL GLGMAATGGS TSGLSVLMNG GLDVGRDFGG  480
QDIR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66730.1	1e-108	C2H2 family protein