PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY23600.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 476aa MW: 49757.6 Da PI: 7.8838

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY23600.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.6	2.3e-05	53	75	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k F r nL+ H r H TEY23600.1 53 FVCEVCNKGFQRDQNLQLHRRGH 75 89*******************88 PP
2	zf-C2H2	11.4	0.00099	129	151	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H + + TEY23600.1 129 WKCDKCSKKYAVQSDWKAHSKIC 151 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 476 aa Download sequence
MNESAASGDS SSGNQTISPQ PTAKKKRNLP GTPDPDAEVI ALSPKTLMAT NRFVCEVCNK 60 GFQRDQNLQL HRRGHNLPWK LRQRSSTDVK KRVYVCPEPS CVHHEPARAL GDLTGIKKHF 120 CRKHGEKKWK CDKCSKKYAV QSDWKAHSKI CGTKEYKCQC GVLFSRRDSY ITHRAFCDAL 180 ADEGAKKTPL AAEPAADADK DLETGVPPAP PPPQQGQAPA PKDPPPAAAD VASSIVPDNS 240 SDDNSNHVTE LLDSTTANPS SSQILEESPN ATSLAARCSS SSCSGSSGSS SSNVFASLFA 300 SSTSSASLQP QTTGFTNLFQ SIACPDYTPD AAPSSSSEPA ALCLAVNQGS SIFGNAGQER 360 RQYPPAPPPA LSATALLQKA AQIGAAAPNM SLLRGLGIVS SSSSPNSTEE WSQQKMETSG 420 GSLASGLGLG LGCDSGSGLK ELMLGTPSVF GPKYTTLDLL GLGMAANGGS TAGYQL

Sequence ? help Back to Top

Protein Sequence Length: 476 aa Download sequence

MNESAASGDS SSGNQTISPQ PTAKKKRNLP GTPDPDAEVI ALSPKTLMAT NRFVCEVCNK  60
GFQRDQNLQL HRRGHNLPWK LRQRSSTDVK KRVYVCPEPS CVHHEPARAL GDLTGIKKHF  120
CRKHGEKKWK CDKCSKKYAV QSDWKAHSKI CGTKEYKCQC GVLFSRRDSY ITHRAFCDAL  180
ADEGAKKTPL AAEPAADADK DLETGVPPAP PPPQQGQAPA PKDPPPAAAD VASSIVPDNS  240
SDDNSNHVTE LLDSTTANPS SSQILEESPN ATSLAARCSS SSCSGSSGSS SSNVFASLFA  300
SSTSSASLQP QTTGFTNLFQ SIACPDYTPD AAPSSSSEPA ALCLAVNQGS SIFGNAGQER  360
RQYPPAPPPA LSATALLQKA AQIGAAAPNM SLLRGLGIVS SSSSPNSTEE WSQQKMETSG  420
GSLASGLGLG LGCDSGSGLK ELMLGTPSVF GPKYTTLDLL GLGMAANGGS TAGYQL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66730.1	1e-107	C2H2 family protein