PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY20693.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 692aa MW: 77417.2 Da PI: 8.8345

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY20693.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.2	6.2e-05	77	98	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 kC++C + F ++ n++rHir+H TEY20693.1 77 KCEKCYREFCSPINYRRHIRVH 98 7*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 692 aa Download sequence
MPAAKLYSSG TLNAMKSEEG NDSLGTFIRQ ATGKEPLLPF PRTVDGPVQW IQLLNALDQP 60 DFSGWLLLTP VKVQMQKCEK CYREFCSPIN YRRHIRVHRR SLNINKEWHK NRDLLAEFWD 120 ELSLQHAKEL VSFSDIILKD IPGSSVVKAL SSSLRKAGVW TLPQAYVKAG ATLLDIIQAK 180 PSRLPISSQE LFSTLDDASE RTFLCAGTAD SVQNYVFDGE TAKNSLELKN LVALTSFLFE 240 QLLVKAWVAD KDAEALRCQK LLVEEEEAEQ KRQAVIVERK KQKKRRQKEQ KVREQYCGCG 300 SNLNIYIDAV DRPTSAEASD MSSPSGSNSN SQEVPTTIDS VQPQNKESDE DIEAQFDASS 360 EHKKQRDSPA VELQMLVANG HRHAATNRLQ ALKSQRGRRY GLHADLNPQT LKPELMHKLG 420 PSKDRRIQNG SKVRTKKFKN NNDWENPMPP SLQEVESNRI EQNNGEVIIG SIPVALKSYY 480 DQQQASPPNE TQDTCSAEQL KKKNASEKPV KCNSLQSGTN RAPSKLWRPV SRGETKNVLT 540 VGRINEDLGD SAMLSKVHNH TSSSERSGQS QSLDSDGCQN RKQFHVISDD NAQGGLMPFS 600 SEAVKEFLAR RWKEAIAGDH IKLALSSERE PPGRPDVQPA SGPPRGNGEN QCGRIIQVQV 660 ARKPDKSVKF KYIPKTETKS YPVGTFDCSE FV

Sequence ? help Back to Top

Protein Sequence Length: 692 aa Download sequence

MPAAKLYSSG TLNAMKSEEG NDSLGTFIRQ ATGKEPLLPF PRTVDGPVQW IQLLNALDQP  60
DFSGWLLLTP VKVQMQKCEK CYREFCSPIN YRRHIRVHRR SLNINKEWHK NRDLLAEFWD  120
ELSLQHAKEL VSFSDIILKD IPGSSVVKAL SSSLRKAGVW TLPQAYVKAG ATLLDIIQAK  180
PSRLPISSQE LFSTLDDASE RTFLCAGTAD SVQNYVFDGE TAKNSLELKN LVALTSFLFE  240
QLLVKAWVAD KDAEALRCQK LLVEEEEAEQ KRQAVIVERK KQKKRRQKEQ KVREQYCGCG  300
SNLNIYIDAV DRPTSAEASD MSSPSGSNSN SQEVPTTIDS VQPQNKESDE DIEAQFDASS  360
EHKKQRDSPA VELQMLVANG HRHAATNRLQ ALKSQRGRRY GLHADLNPQT LKPELMHKLG  420
PSKDRRIQNG SKVRTKKFKN NNDWENPMPP SLQEVESNRI EQNNGEVIIG SIPVALKSYY  480
DQQQASPPNE TQDTCSAEQL KKKNASEKPV KCNSLQSGTN RAPSKLWRPV SRGETKNVLT  540
VGRINEDLGD SAMLSKVHNH TSSSERSGQS QSLDSDGCQN RKQFHVISDD NAQGGLMPFS  600
SEAVKEFLAR RWKEAIAGDH IKLALSSERE PPGRPDVQPA SGPPRGNGEN QCGRIIQVQV  660
ARKPDKSVKF KYIPKTETKS YPVGTFDCSE FV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	279	285	RKKQKKR
2	279	287	RKKQKKRRQ
3	280	288	RKKQKKRRQ
4	283	288	KKRRQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25610.1	1e-101	C2H2 family protein