PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY17529.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MYB

Protein Properties

Length: 438aa MW: 49449.3 Da PI: 10.0539

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY17529.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.1	1.5e-16	13	60	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +grW+ Ed +l+++++ +G g+W+ Iar g++R +k+c++rw +yl TEY17529.1 13 KGRWSSHEDSILINYIAVHGQGRWNDIARDSGLRRNGKSCRLRWKNYL 60 79********************************************97 PP
2	Myb_DNA-binding	47.3	4.7e-15	66	109	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T eE++ + +++ ++G++ W++Ia+ ++ gRt++++k++w++ TEY17529.1 66 RGNITVEEQLCIMKLHSLYGNR-WSKIAKLLP-GRTDNEIKNYWRS 109 7999****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 438 aa Download sequence
MGDNLEEILS VKKGRWSSHE DSILINYIAV HGQGRWNDIA RDSGLRRNGK SCRLRWKNYL 60 QPNVRRGNIT VEEQLCIMKL HSLYGNRWSK IAKLLPGRTD NEIKNYWRSQ VLKPAKQLKY 120 DTNSMELREF VRDIWLPRIH ANYINLASVS GVMMNCNDIN AESVGMDYYW SNSISCDQIA 180 VTNNLCNTPT SSDCGFRDYI YYGLDSPSLL RITQTKTIMP RRFHVLFTIF FLLLSCPSTV 240 SCMELDTWHK EKSIGVAEKK SDWKLRVAEW NRTQVTVSQD GSGDFMSINE AVSSIPLHNT 300 RRVVIRINSG VYREKVSIPK TMRFVILVGN AGDPPTITGN DTASSVRTFQ TATVAVDADY 360 FIAINVKFER AAHGGEERRA GGYQGQRRRS TTAASTVVKT LSTITKAFTT SATASFKAPS 420 TSFSATAHRS MRSPAPFH

Sequence ? help Back to Top

Protein Sequence Length: 438 aa Download sequence

MGDNLEEILS VKKGRWSSHE DSILINYIAV HGQGRWNDIA RDSGLRRNGK SCRLRWKNYL  60
QPNVRRGNIT VEEQLCIMKL HSLYGNRWSK IAKLLPGRTD NEIKNYWRSQ VLKPAKQLKY  120
DTNSMELREF VRDIWLPRIH ANYINLASVS GVMMNCNDIN AESVGMDYYW SNSISCDQIA  180
VTNNLCNTPT SSDCGFRDYI YYGLDSPSLL RITQTKTIMP RRFHVLFTIF FLLLSCPSTV  240
SCMELDTWHK EKSIGVAEKK SDWKLRVAEW NRTQVTVSQD GSGDFMSINE AVSSIPLHNT  300
RRVVIRINSG VYREKVSIPK TMRFVILVGN AGDPPTITGN DTASSVRTFQ TATVAVDADY  360
FIAINVKFER AAHGGEERRA GGYQGQRRRS TTAASTVVKT LSTITKAFTT SATASFKAPS  420
TSFSATAHRS MRSPAPFH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47190.1	6e-61	MYB family protein