PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY17290.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MYB

Protein Properties

Length: 1084aa MW: 123502 Da PI: 8.648

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY17290.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.5	1.1e-16	845	891	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd ll+++v ++G + W+ Ia+++ gR +kqc++rw+++l TEY17290.1 845 KGQWTAEEDRLLIHLVGKYGVRKWSNIAQMLK-GRIGKQCRERWHNHL 891 799**************************9.***********97 PP
2	Myb_DNA-binding	49.3	1.1e-15	897	939	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++ WT eEd +l++++ q G++ W+ Ia+ ++ gRt++ +k++w+ TEY17290.1 897 KDVWTLEEDRILIEVHSQVGNK-WAEIAKSLP-GRTENTIKNHWN 939 578*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 1084 aa Download sequence
MGEEGAVDNM NLNNEEKIKQ KKNDKKSSAK SVVEFHTESA RTSENEGISQ LKRDHKMGKE 60 KKKIKKSKGA KDVEADMKSG SRKGELSVVY GGDRLKSDNA ERNGESFIGL TVDHSGMKSG 120 RREKKKDKNE IVETHDTDEV KREGSINWQE GVNVSGKVRG KEVLKEKIKQ KVKRTDSEVG 180 EKDGELILEH SESCIASATE IREDMKKDKK KEEGCQFCQE NVLYDVEDHT QSTKEDGGTK 240 NNHEVKKKKK HKKKENYKDD LPAAQQKYVD SDSNSGLNTK EIPNNEAAEF TIKRKKRKSK 300 VLENCSSDER DNEAEYAKKG KRRKTSLVVK GSVDTSPNKD NLVMGKRFTR EEDEVVKGAV 360 MKYIEEHELG DEGLQMILNS GKHHEVKGCW KEIASSIPYR PRSAIFYRAR ILFMRSKSRK 420 WTQEEYDMIL KYQEEHGNKW RALADELGKH AWHVKDTWRR IKVRRKKGNW SQEEYQRLFD 480 LVNTDLQLKL SEEKKSKHGM LRDNICWSAI SDELSTRPHS TCCLKWYNQL TSPMVAQGVW 540 ADSDDYRLLS ALYRLDANCV EDVDWDDLID TRAGDVCRKR WNQMVLHIGS NGNKSFAEQV 600 EVLAQRYCLH LLEARATWDS KPRTQETDFH HTHSILSHLA ASFPLMPLLN APMETNKSNC 660 SAISLPTGFS NINLKHEILD DDFVMDNNIS PSKGYLQDFQ DLGQLLVTAS FCNWDTGIHA 720 NGFDPFASLP HGSVTDFGLY KFKPYEENGG MHSAIQDFQA GGFLNFADRK GLSIVTKTAS 780 AHDSKPLCFA VPDESSCVTG NNSGHHNKDG SKRNNNTVHA SNSNVSESLS TKKSVRAPKK 840 SKSAKGQWTA EEDRLLIHLV GKYGVRKWSN IAQMLKGRIG KQCRERWHNH LRPDIKKDVW 900 TLEEDRILIE VHSQVGNKWA EIAKSLPGRT ENTIKNHWNA TKRRQFTRRK CRTKWPRPSS 960 LLQNYIKSLN FEKESSSKRS KKNQPPATTD HGILSNSSIT TAQETNIEFS LDDHMVQEYE 1020 FDEIQALTFD DDSLFTGSSI NMLMDDAIPY EIDDGQCYGA GLPLVIPPLM QCGVKKELDF 1080 HGNV

Sequence ? help Back to Top

Protein Sequence Length: 1084 aa Download sequence

MGEEGAVDNM NLNNEEKIKQ KKNDKKSSAK SVVEFHTESA RTSENEGISQ LKRDHKMGKE  60
KKKIKKSKGA KDVEADMKSG SRKGELSVVY GGDRLKSDNA ERNGESFIGL TVDHSGMKSG  120
RREKKKDKNE IVETHDTDEV KREGSINWQE GVNVSGKVRG KEVLKEKIKQ KVKRTDSEVG  180
EKDGELILEH SESCIASATE IREDMKKDKK KEEGCQFCQE NVLYDVEDHT QSTKEDGGTK  240
NNHEVKKKKK HKKKENYKDD LPAAQQKYVD SDSNSGLNTK EIPNNEAAEF TIKRKKRKSK  300
VLENCSSDER DNEAEYAKKG KRRKTSLVVK GSVDTSPNKD NLVMGKRFTR EEDEVVKGAV  360
MKYIEEHELG DEGLQMILNS GKHHEVKGCW KEIASSIPYR PRSAIFYRAR ILFMRSKSRK  420
WTQEEYDMIL KYQEEHGNKW RALADELGKH AWHVKDTWRR IKVRRKKGNW SQEEYQRLFD  480
LVNTDLQLKL SEEKKSKHGM LRDNICWSAI SDELSTRPHS TCCLKWYNQL TSPMVAQGVW  540
ADSDDYRLLS ALYRLDANCV EDVDWDDLID TRAGDVCRKR WNQMVLHIGS NGNKSFAEQV  600
EVLAQRYCLH LLEARATWDS KPRTQETDFH HTHSILSHLA ASFPLMPLLN APMETNKSNC  660
SAISLPTGFS NINLKHEILD DDFVMDNNIS PSKGYLQDFQ DLGQLLVTAS FCNWDTGIHA  720
NGFDPFASLP HGSVTDFGLY KFKPYEENGG MHSAIQDFQA GGFLNFADRK GLSIVTKTAS  780
AHDSKPLCFA VPDESSCVTG NNSGHHNKDG SKRNNNTVHA SNSNVSESLS TKKSVRAPKK  840
SKSAKGQWTA EEDRLLIHLV GKYGVRKWSN IAQMLKGRIG KQCRERWHNH LRPDIKKDVW  900
TLEEDRILIE VHSQVGNKWA EIAKSLPGRT ENTIKNHWNA TKRRQFTRRK CRTKWPRPSS  960
LLQNYIKSLN FEKESSSKRS KKNQPPATTD HGILSNSSIT TAQETNIEFS LDDHMVQEYE  1020
FDEIQALTFD DDSLFTGSSI NMLMDDAIPY EIDDGQCYGA GLPLVIPPLM QCGVKKELDF  1080
HGNV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	206	252	KKDKKKEEGCQFCQENVLYDVEDHTQSTKEDGGTKNNHEVKKKKKHK
2	293	321	KRKKRKSKVLENCSSDERDNEAEYAKKGK
3	294	322	KRKKRKSKVLENCSSDERDNEAEYAKKGK
4	295	323	KRKKRKSKVLENCSSDERDNEAEYAKKGK
5	464	510	KKDKKKEEGCQFCQENVLYDVEDHTQSTKEDGGTKNNHEVKKKKKHK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41020.1	1e-108	MYB_related family protein