PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY16293.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 172aa MW: 17962.1 Da PI: 7.9095

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY16293.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.9	7.7e-05	70	92	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ Cg++F++ L H +H TEY16293.1 70 YKCSVCGRPFPSYQALGGHKASH 92 9***********99999998887 PP
2	zf-C2H2	11.8	0.00074	118	140	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k F++ L H r+H TEY16293.1 118 HECSVCHKIFPSGQALGGHKRRH 140 78*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 172 aa Download sequence
MALEALTAAA APPLSFDDVS DWPKSKRSKR LSSREQSQDE YLAICLVMLS QGGAAPAVAG 60 DGDGGDSVSY KCSVCGRPFP SYQALGGHKA SHRAKAPAAA EEINSSAAAA LSPSGRRHEC 120 SVCHKIFPSG QALGGHKRRH YEGVIGGSAA RSRVTTVVRD LDLNSLPSDE EV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19580.2	9e-22	C2H2 family protein