PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY15782.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family C3H
Protein Properties Length: 330aa    MW: 36954.6 Da    PI: 7.8188
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY15782.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH48.21.7e-15245270126
                 --S---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHg 26 
                 +ktelC+ +++tG C+yG++C+FaHg
  TEY15782.1 245 FKTELCNKWQQTGACPYGANCQFAHG 270
                 79***********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MQREISISSG ISTMPFNGEF DFDLNPLMYS SIFSPNHSSS FENNYLNDDG SPNFSSAGGE  60
KALDPCLPQF QQLLSQDLTN RHRMVLMRLR SAAKHAQTLR QENVNLKMAN LDLNNQLNLL  120
LNSPPPFRGV DVDPRPGLEN LDDRMRKMSE EEEGTSENEA VARSPTSVMD SGQGGLGEKR  180
VHLPKSISVR SNGYLKAARD YASSSGAGPK VVKALNENNG TQKVYVKGGK KEQAVELEVY  240
NQGMFKTELC NKWQQTGACP YGANCQFAHG IAELRPVLRH PRYKTEVCRM VLNGVPCPYG  300
HRCHFRHTLT EEEELVRAMN TNTLQPMNYR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68200.15e-61C3H family protein