PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY14770.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

NF-YC

Protein Properties

Length: 288aa MW: 32366.1 Da PI: 5.0456

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY14770.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	58.3	1.7e-18	20	94	24	98
NF-YC 24 arikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98 arikki++adedv +i+ +P l+ska elf+ +l r++ + + +tl+ ++++v++ ++fdfl d+v + TEY14770.1 20 ARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCNRTYEVTVKRGAKTLNSMHLKQCVQSFNMFDFLQDTVSK 94 8***********************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 288 aa Download sequence
MIYRILILQV DLIWGNEFHA RIKKIMQADE DVGKIAMAVP LLVSKALELF LQDLCNRTYE 60 VTVKRGAKTL NSMHLKQCVQ SFNMFDFLQD TVSKVSDLGG VDAANEDKST TKRKISYDDK 120 CGNEHGSKRI RMHETSQTSS DGRSRGRGRG RGRGSKKLHR KSLDQFERLD YDSDISNQSG 180 KNQNEKLERS CSVVADTTAD SRITGGKDAD KAVFTFDLNV ELDENGDSIL LNDGTPSDSS 240 EKPSPGTRHE DIPGWSLDNM EMLAFDVIQL ASLKKRMDEE DEDYDEEG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	143	153	RSRGRGRGRGR
2	145	154	RGRGRGRGRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G19490.1	2e-50	NF-YC family protein