PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY14725.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 321aa MW: 36981.9 Da PI: 9.4063

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY14725.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.8	9.1e-06	168	187	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C++C+k+F+r n++ H+ TEY14725.1 168 FSCNICSKTFNRYNNMQMHM 187 89*****************9 PP
2	zf-C2H2	12.4	0.00048	252	275	1	23
EEET.TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp.dCgksFsrksnLkrHirtH 23 + C CgksF k + ++H +++ TEY14725.1 252 FACRkSCGKSFAVKGDWRTHEKNC 275 77999***************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence
MLKNIKLCLD TRNSIEWLKS FPSPSSSTQN HSKNAMNFFQ FPLFYQQQQQ AAHNHDQERE 60 NYMYETIQCL PLLSRFTEKK EVKEEEDEGV DREKRGRLNE NVTVALHIGL PEVGGIEGDK 120 RKRYGFREDD EEYSVKKKMS KSSNGSLNGE RRFWIPTPAQ ILVGPMQFSC NICSKTFNRY 180 NNMQMHMWGH GSEFRKGPES LRGTQPAAML RLPCYCCAAG CKNNVNHPRA KPLKDFRTLQ 240 THYKRKHGAK PFACRKSCGK SFAVKGDWRT HEKNCGKLWY CTCGSDFKHK RSLKDHIRSF 300 GNGHAPHPTL EGFACSDDDT A

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	120	141	KRKRYGFREDDEEYSVKKKMSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08290.1	1e-112	C2H2 family protein