PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY13956.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 271aa MW: 28760.4 Da PI: 7.4545

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY13956.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.3	0.00025	79	101	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ C+k F++ L H +H TEY13956.1 79 YKCSVCDKAFPSYQALGGHKASH 101 9***********99999998887 PP
2	zf-C2H2	10.8	0.0015	125	147	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k+F + L H r+H TEY13956.1 125 HECSICHKRFGTGQALGGHKRRH 147 78*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 271 aa Download sequence
MALDALNSSS ALSRRFDDVE PCGAMQWPKS KRSKRRDQSE DEYLAVCLVM LARSGAAPGE 60 DIKSVAGAEE SPKSAAANYK CSVCDKAFPS YQALGGHKAS HRGKAASDES NHSAAAALNP 120 SGRIHECSIC HKRFGTGQAL GGHKRRHYEG VIGGSAAKSR TTSSTAAVAR DFDLNMPPPP 180 PSPELHCDEE GSGISRGKMA TCELYRISTI GVCLTEILDQ MVSSGVLSPE LAIQSMTDAL 240 ENEVKSKVSI KLLVVLATSS RCHAEDNVVL N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49930.1	6e-35	C2H2 family protein