PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TEY12501.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 243aa MW: 27221.2 Da PI: 8.817 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 23.7 | 8.5e-08 | 21 | 70 | 5 | 35 |
HHHHHHHHHHHHHHHHHHHHCTSCC.C.....................TT CS HLH 5 hnerErrRRdriNsafeeLrellPk.as..................kaps 35 +++E++RR ++++ +++L +llP+ +s k+ TEY12501.1 21 RKIIEKNRRTKMKNLYNQLVSLLPHqPSpvdgaplpdqideavehiKGMT 70 579**********************6655555555555555555555555 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 243 aa Download sequence |
MGKPRRIRSN SNSDTAPKIE RKIIEKNRRT KMKNLYNQLV SLLPHQPSPV DGAPLPDQID 60 EAVEHIKGMT TKLEKLKQKR DLLLEKKKQL INNSCVTNIQ NKATNNASSS SPLVEVQDMG 120 PNLDVILAND LQNYTSFRDI VRLVHQHGVE IASASFARDG NSSIQVLHDK VVNPKPGFDG 180 ATITRKMKEL ACNKGASSMS EVVESDISLW DYEIDSKINW GFEIPEVLLP GLQEFMITMN 240 KCS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G20970.1 | 9e-24 | bHLH family protein |