PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro07_G07937 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | ERF | ||||||||
Protein Properties | Length: 213aa MW: 23546 Da PI: 6.2432 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.5 | 3.4e-18 | 44 | 94 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr ++ +g+Wv+eIr+p++ + r++lg+f +e+Aaka++ a+ +l+g Ro07_G07937 44 PVYRGVRKRR-WGKWVSEIREPRK---KSRIWLGSFPVPEMAAKAYDVAAYCLKG 94 68*****887.**********843...6*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MEKPPYTEDD LSTPTTTTTT AATSTTIQNH ENQPDSQRSG TRHPVYRGVR KRRWGKWVSE 60 IREPRKKSRI WLGSFPVPEM AAKAYDVAAY CLKGRKAQLN FPDEVEHLPR PSTCTARDIQ 120 AAAAKAAQTM KSSSSTENSN RSNDLHLQDH HDVSDGGDDF WGEIELPELM NSGTCYSNSC 180 GWSTVSGDAA ALTWSEAEAF MLPSSVRPVV LAD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01250.1 | 2e-56 | ERF family protein |