PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro06_G11621 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | C2H2 | ||||||||
Protein Properties | Length: 115aa MW: 13020.8 Da PI: 7.6441 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15.2 | 6.1e-05 | 43 | 64 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C++Cg+ F ++ + H++ H Ro06_G11621 43 ECHYCGREFENSQAYGGHQNAH 64 7*************99999988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 115 aa Download sequence |
MSASASDHCT KQSSSSAMKL FGFLLTADHC EDGAAMKKSK KLECHYCGRE FENSQAYGGH 60 QNAHRKERKL AMMAKLELEE DHHQLLPPQL FPTAARVLPK DYEGHDHVID LRLRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58070.1 | 2e-13 | C2H2 family protein |