PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro05_G24926 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | G2-like | ||||||||
Protein Properties | Length: 285aa MW: 32359.3 Da PI: 8.0743 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 105.9 | 2.2e-33 | 27 | 81 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWtp+LH+rFv+av++LGG++kAtPk++l+lm++kgLtl+h+kSHLQkYRl Ro05_G24926 27 KPRLRWTPDLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQKYRL 81 79****************************************************8 PP | |||||||
2 | Myb_DNA-binding | 68.5 | 1.1e-21 | 29 | 80 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++++vdav++lGg+ t+k++ r mg kg+tl+++ks++qky+ Ro05_G24926 29 RLRWTPDLHDRFVDAVTKLGGPdkaTPKSVLRLMGlKGLTLYHLKSHLQKYR 80 89*************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 285 aa Download sequence |
MEMNYNNYGG EESCPYENGV MMTRDPKPRL RWTPDLHDRF VDAVTKLGGP DKATPKSVLR 60 LMGLKGLTLY HLKSHLQKYR LGQQARKQNS AEQGRENNGD SFVHFSNNHS TGSTTKSSRG 120 NAEQGTIPLS DALKCQIEVQ NRLQEQLEVQ KKLQMRIEAQ GKYLQAILEK AKKGLSVDMK 180 GPITVEATRA QLTDFNLALS HFMENMSEEE RRGNIIEMNE AYKKSNGSTF QIYEEGNIEE 240 NKDSKLKVER GSIHFDLNTK GSYDYVGTNG TELEPRCFRL QDSTL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G45580.1 | 6e-80 | G2-like family protein |