PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro05_G07373 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | C2H2 | ||||||||
Protein Properties | Length: 242aa MW: 26313.1 Da PI: 6.0124 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.3 | 0.00012 | 67 | 89 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C + F++ L H+++H Ro05_G07373 67 YTCTFCRREFRSAQALGGHMNVH 89 9********************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MAELGLLSLT QLQKLALSQQ SHQSNPRSVW MWNPKQAQDQ EDDSWEVRAF AEDTGNAMGT 60 TWPPRSYTCT FCRREFRSAQ ALGGHMNVHR RDRAILHEVQ HPSSISINPS AVSSSNSSFI 120 IPTQEFLAAN GGLCLLYQLP NPNNGAFSST SIATTPTATL INNTVESSTS VVPSTLLSIP 180 PNPPHDYLVT SSSCFVGPHG VADSSKNSHC HSKRSADQDQ PSRSGVVDDV EEIDLELRLG 240 PS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17810.1 | 2e-33 | C2H2 family protein |