PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro03_G18867 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | ERF | ||||||||
Protein Properties | Length: 212aa MW: 23217.6 Da PI: 8.0359 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.1 | 2.6e-19 | 31 | 80 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr ++ +g+++AeIrdp++ + r++lg+f +ae+Aa+a++aa++ l+g Ro03_G18867 31 KYRGVRKRP-WGKYAAEIRDPYK---KSRVWLGTFESAEDAARAYDAAARVLRG 80 8********.**********765...6***********************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
MRRGRGAAVA AARATGPVAE PNGSIPIKEV KYRGVRKRPW GKYAAEIRDP YKKSRVWLGT 60 FESAEDAARA YDAAARVLRG PKAKTNFPTY SNHFCYNNPT DANFDNKLFG SGYGFLDDNP 120 VDPNRPASSS LSSTVESFSG PRQATQQSTT IAAESSRRKQ PRTPPMDPED CHSDCDSSSS 180 VVEDDGDFVA SSFRNPLAFD LNFPPLDEAM QI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20310.1 | 8e-30 | ERF family protein |