PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro03_G14536 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | ERF | ||||||||
Protein Properties | Length: 174aa MW: 19551.8 Da PI: 4.3803 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.4 | 4.9e-20 | 13 | 61 | 4 | 56 |
AP2 4 kGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 kGVr+++ +grW+AeIrdp++ rkr +lg+f taeeAa +++a++kl+g+ Ro03_G14536 13 KGVRRRP-WGRWAAEIRDPTQ---RKRLWLGTFNTAEEAAIIYDRAALKLRGP 61 9******.**********965...5**************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 174 aa Download sequence |
MAKFSEHVIS MSKGVRRRPW GRWAAEIRDP TQRKRLWLGT FNTAEEAAII YDRAALKLRG 60 PDAVTNFPNA VVTEKTAAAE VPTTHEEEED RSFGSATCDS PPNEEPALSP TSVLRYEDPT 120 PFDGFRYCDV HAFGFDIDVP LLSLPDMMVP ANNNFNHDEF GEFDVNDFLV DVIS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27950.1 | 5e-31 | ERF family protein |