PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro02_G15900 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | C2H2 | ||||||||
Protein Properties | Length: 186aa MW: 19521.8 Da PI: 8.6145 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11 | 0.0013 | 28 | 50 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C C+k F + L H +H Ro02_G15900 28 YRCDVCNKAFGSYQALGGHKASH 50 9*********9999998888777 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence |
MLLARGTTNT ATPAAEPTHP PPHPPASYRC DVCNKAFGSY QALGGHKASH RKSDASAAAA 60 VKTEIQTVSA VSTGMAASGR THECTICHKC FPTGQALGGH KRCHYDGGSS TANSAVTTIS 120 EGGGASSHSQ TQSQRGFVLD LNLPAEPEVQ VWPGFDKKKS ARVSADQEEV QSPMPEKKPR 180 LTLGRE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G27730.1 | 9e-40 | C2H2 family protein |