PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro02_G00472 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | bZIP | ||||||||
Protein Properties | Length: 159aa MW: 18340.3 Da PI: 8.228 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 33.8 | 7.2e-11 | 70 | 119 | 5 | 54 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 + rrk +NRe+ArrsR RKk +e L+e++ L eN++Lk++l + Ro02_G00472 70 RQKRRKTSNRESARRSRWRKKRHLEDLTEEASRLRMENRELKNRLGLVAQ 119 467999************************************99977655 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence |
MSECTSPALF FTGAEEPVQF QCPAQETGFT TSDIEELLSL LQEGNSNSNS GSPNSGSEGS 60 NRAVYSVDER QKRRKTSNRE SARRSRWRKK RHLEDLTEEA SRLRMENREL KNRLGLVAQK 120 FHVTWRENER LESESLALWA RLSDLNRVLV AMQMQQSQY |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 72 | 91 | KRRKTSNRESARRSRWRKKR |
2 | 73 | 92 | KRRKTSNRESARRSRWRKKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G59530.1 | 1e-19 | bZIP family protein |