PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro01_G16897 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | Trihelix | ||||||||
Protein Properties | Length: 65aa MW: 7962.09 Da PI: 9.5723 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 56.6 | 6.6e-18 | 7 | 61 | 29 | 84 |
trihelix 29 plWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdq 84 +lWee+s+ m++ + r++k+Ckekwen+nk+ +++k+++kkr +e+s+t++ f++ Ro01_G16897 7 NLWEEISASMKKLDYDRNAKRCKEKWENINKYCRRLKDSNKKR-PEDSKTYRSFEN 61 69****************************************8.99999**99985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 65 aa Download sequence |
MDLEGINLWE EISASMKKLD YDRNAKRCKE KWENINKYCR RLKDSNKKRP EDSKTYRSFE 60 NFVLV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G33240.1 | 3e-21 | Trihelix family protein |