PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro01_G10361 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | ERF | ||||||||
Protein Properties | Length: 217aa MW: 24226.2 Da PI: 7.9808 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.4 | 1.8e-18 | 6 | 54 | 1 | 53 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53 ++++GVr+++ +g+Wv+eIr+p +r++lg+f +aeeAa+a+++a+ + Ro01_G10361 6 KKFRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFESAEEAARAYDEAAVLM 54 59*******9.**********8.....334*********************9765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence |
MVQSTKKFRG VRQRHWGSWV SEIRHPLLKR RVWLGTFESA EEAARAYDEA AVLMSGRNAK 60 TNFPITAQSS SSTSPGNDSS SRNGGLSEIL RAKLRKCSNA LSPSMTCLRL DNESSHIGVW 120 QKCAGRPSDH WVMTVQLGKK NTNNAGDTNN QQSILSPLLC SESPAYERPK LIAEDAHEMN 180 EEEKISLQMI EELLNRNFPM PNSSAAIDQQ EDGSFYL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G15360.1 | 1e-55 | ERF family protein |