PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_ssc0000433.1_g000004.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 131aa MW: 14933.2 Da PI: 10.0704 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 66.1 | 9.6e-21 | 44 | 129 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtklel 83 +fYn+YA e+GFsvr+s++ ksk+ e+++++++C ke ++++++ ++++ rtgC ak+ k+ g +++t++++ Rmu_ssc0000433.1_g000004.1 44 EFYNKYAFEAGFSVRRSSTAKSKDGSETIRQELCCRKEWHSQKHTAL---PKKRKGIIRTGCLAKIAAVKR-CGIYVITQFKE 122 6*************************************999887766...7888999*********98888.8********** PP FAR1 84 eHnHela 90 HnH+l+ Rmu_ssc0000433.1_g000004.1 123 AHNHPLT 129 *****97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 131 aa Download sequence |
MFQAMNLGSV SCSAETTEVY TPQVADELKP TKNREFRTLD KLFEFYNKYA FEAGFSVRRS 60 STAKSKDGSE TIRQELCCRK EWHSQKHTAL PKKRKGIIRT GCLAKIAAVK RCGIYVITQF 120 KEAHNHPLTT P |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G59470.2 | 3e-12 | FAR1 family protein |