PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_ssc0000425.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

WRKY

Protein Properties

Length: 332aa MW: 36353.4 Da PI: 7.8941

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_ssc0000425.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.5	1.8e-30	153	211	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+ver+++dp ++++tY+ eHnh+ Rmu_ssc0000425.1_g000001.1 153 SDVWAWRKYGQKPIKGSPYPRGYYRCSSSkGCMARKQVERNRSDPGMFIVTYTAEHNHP 211 79***********************998**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence
MEDDWDLTAV VRGCSTIPTT TTTTTNKPTN PFITDHFHTS PLPSSFGQQG FVSDSTTQTF 60 SVLPLPPDPI KPTSTIEELH DLYKPFFPKS QQTPSLLSPP PQITPQPTFS SPQPLHRHQQ 120 HQPKLSATNP QRSKKRKNQL KKVCQVPAES LSSDVWAWRK YGQKPIKGSP YPRGYYRCSS 180 SKGCMARKQV ERNRSDPGMF IVTYTAEHNH PAPTHRNSLA GSTRHKPVSS PQSGSVTGGD 240 STKPKGCSPS PTTSAEEELG RSTTRMEAKD EKQSPMADED ETEYFGVCDT IVSDDFFVGL 300 EGLAGDYFSD HFTVSFGGPW SSGSAATAAS SI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01250.1	1e-74	WRKY family protein