PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_ssc0000215.1_g000024.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB_related
Protein Properties Length: 189aa    MW: 21420 Da    PI: 5.3495
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_ssc0000215.1_g000024.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.53.5e-14121164447
                                 S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
             Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                                 WT+eE++l++++ k +G+g+Wk+I+r+    R + q+ s+ qky
  Rmu_ssc0000215.1_g000024.1 121 WTEEEHKLFLQGLKIYGKGDWKSISRHCVMSRNPTQVASHAQKY 164
                                 *****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MEPFSFFPTA PSPPFPSSSS SALLESTAQL AEDGDQWTFE ENKRFETALA EFDLGAPDLF  60
DNIQTRVPGK TLWEIKKHLD DLFEDIEKIE TGIIPIPDYK TTPTQVKSNP RSQPRKKGVI  120
WTEEEHKLFL QGLKIYGKGD WKSISRHCVM SRNPTQVASH AQKYFLRLQN SAESEQNANG  180
ECSTSNNKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58900.14e-45MYB_related family protein