PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_ssc0000110.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | GeBP | ||||||||
Protein Properties | Length: 214aa MW: 23963.3 Da PI: 10.3201 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 68.8 | 1.2e-21 | 1 | 64 | 34 | 97 |
DUF573 34 idafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 + af+ef+k+s++++vsk+ql++K rrLKkK++++ +k ++g+ p+fsk+h+ k+f+lskkiWg Rmu_ssc0000110.1_g000001.1 1 MGAFHEFLKRSLKADVSKNQLMDKTRRLKKKYHTNAEKGENGEGPVFSKAHELKSFDLSKKIWG 64 579************************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MGAFHEFLKR SLKADVSKNQ LMDKTRRLKK KYHTNAEKGE NGEGPVFSKA HELKSFDLSK 60 KIWGAEANGG DDSAKNSRKK PRKSAKANNN NNSSTVLALP VSDAAAERSV EKKVKVEEMN 120 VANGGVKAAE SDDFWSKYPS LSDSLQLANC SSRWEGLERV MIQKMPSIGS SKAKELDDRW 180 RKLQLLEMEL SVKKLDLMHE QAKLLLDGIK SRKD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 79 | 115 | KKPRKSAKANNNNNSSTVLALPVSDAAAERSVEKKVK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G11510.1 | 6e-15 | GeBP family protein |