PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_ssc0000073.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | MYB | ||||||||
Protein Properties | Length: 224aa MW: 24822.2 Da PI: 8.9693 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.5 | 5.7e-17 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ +++ +G g+W++ ++ g+ R++k+c++rw +yl Rmu_ssc0000073.1_g000001.1 15 KGAWTKEEDDRLIAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 62 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 60.4 | 3.7e-19 | 68 | 112 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T+eEdel+++++ +lG++ W++Ia +++ gRt++++k++w+++ Rmu_ssc0000073.1_g000001.1 68 RGNFTEEEDELIIKLHSLLGNK-WSLIAGRLP-GRTDNEIKNYWNTH 112 89********************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
LMGRSPCCEK AHTNKGAWTK EEDDRLIAYI RAHGEGCWRS LPKAAGLLRC GKSCRLRWIN 60 YLRPDLKRGN FTEEEDELII KLHSLLGNKW SLIAGRLPGR TDNEIKNYWN THIRRKLLTR 120 GIDPATHRPL NETPQDSATT TTISFAASSA IIKEEDQKIS TTESLKSGGR GVCFSCSLGL 180 KDSKSCSSCG IDNIGATSAG TSNIAYDFLG LKNGVLDYRS LEMK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38620.1 | 4e-92 | MYB family protein |