PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_ssc0000005.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | bZIP | ||||||||
Protein Properties | Length: 180aa MW: 19450.2 Da PI: 11.0432 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 51.9 | 1.6e-16 | 103 | 158 | 5 | 60 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++eN+ Lkk+ +e+ ++ ++ + Rmu_ssc0000005.1_g000001.1 103 RRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENENLKKKQDEMMELQKNQD 158 79******************************************999998876655 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 180 aa Download sequence |
MGMGPNSQLG SPGMRGGILG IGEQGMSNAL VQSPVLQGGG MSMVGLGGGN GRVAAVSPAN 60 QLSSDGIGKS NGTDTSSVSP MPYVFNNGFR GRKGGPVEKV VERRQRRMIK NRESAARSRA 120 RKQAYTMELE AEVAKLKEEN ENLKKKQDEM MELQKNQDME IQNLQRGGKR RCLRRTQTGP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G45249.1 | 6e-48 | bZIP family protein |