PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0042286.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

ERF

Protein Properties

Length: 482aa MW: 53030.2 Da PI: 10.4957

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0042286.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	52.5	1.3e-16	414	463	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 ++ GVr+++ +g+W+AeIr+p + +r +lg+f+tae+Aa +++a+ l+g Rmu_sc0042286.1_g000001.1 414 KFLGVRQRP-WGKWAAEIREP-----HsgRRLWLGTFDTAEDAAMVYDKAAVLLRG 463 688****.******7.....337********************98887 PP

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence
MGQDIIKQLK GMNGQAVPVG YGSPNSDAGH VVLGSSKRCS FQAQEKLSRP FVSLGQDVTN 60 RLKFKLKRME MRSRGYESPK DDARQVVLEA SRRGSFLQAP EKHAKTLDGT GQDGRAGLGA 120 SITILNVDFM ISCSFLQAPE KHAEMFDNTG HNGSPVPVGL DSRKGDARHL VLELPKSFRQ 180 AQKKRSKTLA NRGQDVTNKS KALDWNAVSF GCDSPKDDAR HVVLEASKSF LQAHEKHSKK 240 LDNMGQDLTE KLKVKLKLKK GLHGRPVPVR DDALKGDAGN LVLEASKSLE QSIGGLIDGG 300 GNTEVDQHTQ METKSIKPRL VRISVTDGDA TESSSDEEAE PLATSHRVKK FINEIMIESS 360 STKTDSGVWR SRTTRMWRKK TGGKSGLPAT CRTLKAQTTW KKFRGVKAQA TKNKFLGVRQ 420 RPWGKWAAEI REPHSGRRLW LGTFDTAEDA AMVYDKAAVL LRGPDTFTNF STPQVANEDG 480 NL

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence

MGQDIIKQLK GMNGQAVPVG YGSPNSDAGH VVLGSSKRCS FQAQEKLSRP FVSLGQDVTN  60
RLKFKLKRME MRSRGYESPK DDARQVVLEA SRRGSFLQAP EKHAKTLDGT GQDGRAGLGA  120
SITILNVDFM ISCSFLQAPE KHAEMFDNTG HNGSPVPVGL DSRKGDARHL VLELPKSFRQ  180
AQKKRSKTLA NRGQDVTNKS KALDWNAVSF GCDSPKDDAR HVVLEASKSF LQAHEKHSKK  240
LDNMGQDLTE KLKVKLKLKK GLHGRPVPVR DDALKGDAGN LVLEASKSLE QSIGGLIDGG  300
GNTEVDQHTQ METKSIKPRL VRISVTDGDA TESSSDEEAE PLATSHRVKK FINEIMIESS  360
STKTDSGVWR SRTTRMWRKK TGGKSGLPAT CRTLKAQTTW KKFRGVKAQA TKNKFLGVRQ  420
RPWGKWAAEI REPHSGRRLW LGTFDTAEDA AMVYDKAAVL LRGPDTFTNF STPQVANEDG  480
NL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53290.1	7e-30	ERF family protein