PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0039534.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 196aa    MW: 22147.7 Da    PI: 6.9393
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0039534.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.51.5e-172373155
                        AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                               + y+GVr++  +++Wv+e+r+p   +k++r++lg++ tae+A +a++ a+++l+g
  Rmu_sc0039534.1_g000001.1 23 PVYRGVRRRN-NNKWVCEVREP---NKKTRIWLGTYPTAEMAGRAHDVAALALRG 73
                               68*****887.8******9998...347*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
VILASSRPKK RAGRRVFKET RHPVYRGVRR RNNNKWVCEV REPNKKTRIW LGTYPTAEMA  60
GRAHDVAALA LRGKQACLNF ADSAWRLPVP ASKDQLDIRR AAAEAAETFR PEEFGGVSSS  120
CDDNEREHEN EKAATDNEKE NGFFEDDEAV FDMPRLLTNM AEGLLLSPPR HYLDGVNRGD  180
DDVESGSSLN LWSYSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25480.12e-68ERF family protein