PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0033719.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | MYB | ||||||||
Protein Properties | Length: 105aa MW: 11533 Da PI: 10.7634 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 61.3 | 2.1e-19 | 10 | 55 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W+++Ed l+++v+++G+++W++I++ ++ gR++k+c++rw + Rmu_sc0033719.1_g000001.1 10 KGSWSPQEDSTLIKLVAEHGPRNWSLISSSIP-GRSGKSCRLRWCNQ 55 799*****************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 54.9 | 2e-17 | 63 | 104 | 2 | 45 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++++ Ed +v+a++++G++ W+tIar ++ gRt++ +k++w+ Rmu_sc0033719.1_g000001.1 63 KPFSPAEDAAIVRAHALHGNK-WATIARLLP-GRTDNAIKNHWN 104 689******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 105 aa Download sequence |
MSGGGDNRVK GSWSPQEDST LIKLVAEHGP RNWSLISSSI PGRSGKSCRL RWCNQLSPDV 60 QHKPFSPAED AAIVRAHALH GNKWATIARL LPGRTDNAIK NHWNS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37260.1 | 2e-53 | MYB family protein |