PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0025693.1_g000002.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 239aa    MW: 26419.1 Da    PI: 4.9368
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0025693.1_g000002.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.34e-1885135255
                        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                +++GVr+++ +g+++AeIrdp++ng  +r++lg++  ae+A  a+++a+ k++g
  Rmu_sc0025693.1_g000002.1  85 HFRGVRRRP-WGKYAAEIRDPKKNG--TRVWLGTYEKAEDAGLAYDRAAFKMRG 135
                                69*******.***********9998..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MSTETSFSNS DWALLESIRQ HLLEDDFDAQ SAFSTDSPAQ NTSSSNCTEI SNSDAEIVEQ  60
NQAFTSEFEA EVAAREHHTP SGQRHFRGVR RRPWGKYAAE IRDPKKNGTR VWLGTYEKAE  120
DAGLAYDRAA FKMRGSKAKL NFPHLIGMHN VEVGRVLPKR ASPEPSSPSS TTSSEDGSPK  180
PKRRRGGVGS AAAEAQLEEA AQEFHVFQVD SFTFCNELLV EDMALLSPSE CSDILSFLE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.12e-38ERF family protein