PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0021196.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 197aa    MW: 22365 Da    PI: 5.3052
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0021196.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox505.1e-1647107357
                                --SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                   Homeobox   3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                                +R+t+t++ql++L+el++    ++p+ e+++ +  +l    +++ ++V++WFqN +a+e++
  Rmu_sc0021196.1_g000001.1  47 NRWTPTPDQLRILQELYYDraLKNPTPEQIQGICLHLkpfgQIENKNVFFWFQNLKARERQ 107
                                7****************96579*************************************97 PP
2Wus_type_Homeobox93.12.5e-3045108264
          Wus_type_Homeobox   2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 
                                +++RWtPtp+Q++iL+ely+ ++l++P+ e+iq i  +L+ +G+ie+kNVf+WFQN kaRerqk
  Rmu_sc0021196.1_g000001.1  45 TNNRWTPTPDQLRILQELYYdRALKNPTPEQIQGICLHLKPFGQIENKNVFFWFQNLKARERQK 108
                                679***************9879*****************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MEPRTLQLME LQTQQQMELQ AQQPTEEGGS IQAAGSSANT PIRPTNNRWT PTPDQLRILQ  60
ELYYDRALKN PTPEQIQGIC LHLKPFGQIE NKNVFFWFQN LKARERQKLR EFRNVRVGGS  120
LDLNFGSTSS TDDGRSIDLN FGSTGSTSTN RSIDLNFGLR VGYGVDGSIM QQRGEYHQEI  180
ETLPLFPMHG EDIFGNM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.12e-25WOX family protein