PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0019694.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

WOX

Protein Properties

Length: 286aa MW: 31561.2 Da PI: 9.8685

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0019694.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.4	1e-17	18	78	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++ +eq+++Le+ F++ +p ++e++++ ++l ++ +++V++WFqNr+ + k+ Rmu_sc0019694.1_g000001.1 18 KPRWNPRPEQIRILEAIFNSgMVNPPRDEIRKIRAQLqeygQVGDANVFYWFQNRKSRSKH 78 89***************99***********************************995 PP
2	Wus_type_Homeobox	112.2	2.8e-36	17	79	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +++RW+P+peQi+iLe++++sG+++P+++ei++i+a+L+eyG+++d+NVfyWFQNrk+R+++k Rmu_sc0019694.1_g000001.1 17 PKPRWNPRPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHK 79 689**********************************************************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 286 aa Download sequence
MSAMVYAGIE DQRTPEPKPR WNPRPEQIRI LEAIFNSGMV NPPRDEIRKI RAQLQEYGQV 60 GDANVFYWFQ NRKSRSKHKL RLQHINSKQQ QQSHKPSLTA APSSSSSSSE RSSPNKQQQQ 120 SNKAFSMGFS SPPHVVTTHD VSNINSPTAS VNQTSFFHAL PNPEVLPESA YFFPVNNPST 180 NGPVASASFS TTQGFCFSEL ANVVHVNNSP DLHGPCTSLL LSEIMNNNGM ASRKNGQDQE 240 MKGIKMDQLQ QQLNYNGAVT TSPTTTGAVN VAVPSPMTHI QGNLRN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45980.1	2e-40	WOX family protein