PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0018801.1_g000002.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

TCP

Protein Properties

Length: 336aa MW: 35846.5 Da PI: 9.5514

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0018801.1_g000002.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	112.6	5.5e-35	81	166	2	87
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasn 84 a+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLl qa+p+i ++tgt++++as+ a+ s+s+++ Rmu_sc0018801.1_g000002.1 81 APKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLHQAEPSILAATGTGTIPASALaAAGGSVSQQG- 163 789******************************************************************98854444444433. PP TCP 85 sss 87 s Rmu_sc0018801.1_g000002.1 164 TSL 166 222 PP

Sequence ? help Back to Top
Protein Sequence Length: 336 aa Download sequence
MDPKASKQPQ EIPSFLSLPQ PQQQQHHHQQ HHHQQQPNTT MSENNNNSSN HNNNNNVVKP 60 AEIKDFQIAI ADKDETKKQL APKRSSNKDR HTKVEGRGRR IRMPALCAAR IFQLTRELGH 120 KSDGETIQWL LHQAEPSILA ATGTGTIPAS ALAAAGGSVS QQGTSLSAGL HQKIDELGGG 180 GSSGGRTSWA MVGGNLGRPH VAAATGLWPP AGFGFSSQSS SSGPSTTNLG GTESSSNYLQ 240 KIGFPGGFDL PVTNMGPMSF TSILGGGSQQ LPGLELGLSQ DGHLGVLNSQ AALNQIYQQM 300 GHARVHHQQQ HPQQHQHQHQ HQQAPSSKDD SQGSGQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	6e-66	TCP family protein