PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0018138.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB_related
Protein Properties Length: 295aa    MW: 32739.8 Da    PI: 4.627
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0018138.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.11.7e-121768348
                               SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT......TTS-HHHHHHHHHHHT CS
            Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmg......kgRtlkqcksrwqkyl 48
                                WTt+E++ll++av+++G+ +W+++a+ +        ++t+  ck+++++++
  Rmu_sc0018138.1_g000001.1 17 TWTTWEELLLACAVHRYGTQSWDSVAAQLRkrssnlHHLTPQICKHKFHDLR 68
                               7*****************************9999999999999999999875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MDKPNFPEKQ TTATTTTWTT WEELLLACAV HRYGTQSWDS VAAQLRKRSS NLHHLTPQIC  60
KHKFHDLRRR FNHHHDAAVG DGDDAASSPI PWLDQLRQQR LDELRREVQR SDVSIVSLQS  120
KVERLKEVRE KLDLDKSGEE QEIKDKSVEP ENVAEKEVSE RNDGRSFDES NTTDPKPEIP  180
ETGVDAAEKE SEPVEPAAGE IGAVEKSSNP VVVEDSCNGS SDSVVKEAPV AESEKANSGE  240
LRESVAESKG TKESRSSSEV QSSASLSRKL GPELKPSEPV EPDQEDQSPA MNQIP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57980.11e-25MYB_related family protein