PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0017116.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | HB-other | ||||||||
Protein Properties | Length: 166aa MW: 18704.7 Da PI: 4.5082 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 20.8 | 6.7e-07 | 16 | 45 | 30 | 57 |
HHHHHHHC..TS-HHHHHHHHHHHHHHHHC CS Homeobox 30 reeLAkkl..gLterqVkvWFqNrRakekk 57 eL ++ +++ ++V++WFqN +a+e++ Rmu_sc0017116.1_g000001.1 16 QMELQAQQptEIENKNVFFWFQNLKARERQ 45 44444443459*****************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 166 aa Download sequence |
MEPRTLQLME LQTQQQMELQ AQQPTEIENK NVFFWFQNLK ARERQKLREF RNVRVGGSLD 60 LNFGSTSSTD DGRSIDLNFG STGSTSTDRS IDLNFGLRVG YGVDGSIMEQ RGEYHQEIET 120 LPLFPMHGED IFGNMKTTSE GGSGYGGGSR ISLELSLNFY RDADMA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G05770.1 | 5e-08 | WOX family protein |