PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0012099.1_g000006.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

MYB

Protein Properties

Length: 656aa MW: 74399.5 Da PI: 8.8441

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0012099.1_g000006.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.1	4.2e-08	463	504	2	40
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqc 40 ++W++eE ell +av ++++g +W+ ++ +g+gR+ +++ Rmu_sc0012099.1_g000006.1 463 KPWSKEEIELLRKAVVKFPKGtsrRWEVVSDFIGTGRSVEEI 504 69***********************************99876 PP
2	Myb_DNA-binding	26.8	1.2e-08	599	643	3	45
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 W++ + lv+a k ++++ +W+++a+ ++ g++ +qck ++ Rmu_sc0012099.1_g000006.1 599 VWSAVQERALVQALKTFPKEasqRWERVAAAVP-GKSVNQCKKKFS 643 6******************************.******9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 656 aa Download sequence
MGVESKLRLI TYSEEIVDGQ PIYVSSNGLP VKAVGKEPAG HSFHAVALKF RGWVEEVASA 60 AEPKAVDGKE QTSLPSFDSY SSSKGKKKSG GEGKQQDHYA LLGLSHLRYL ATEEQIRKSY 120 RETALKYHPD KQASLLLAEE SEAAKETKKD EIETHFKSIQ EAYEVLIDPV KRRIYDSTDE 180 FDDEIPTECA PQDFFKVFGP AFMRNGRWSV NQPIPFLGDE NTSLKEVDDF YNFWYTFKSW 240 REFPHEEEFD LEQAESRDHK RWMERQNAKL TEKARKEEYA RIRTLVDNAY KRDPRIVKRK 300 EAEKAEKQKK KQAKYLAKKL QEEEAARAAE EEKQRKEEEE KRAAEAASQQ KKLREKEKKL 360 LRKERSRLRT LSGPVISQRV LNLAEDDVES LCMSLNIEQL RNICDRMEGK EGVERAKVLR 420 GAHGGDNNDV EGKKEEEKKT PQQNGSVVSN GTVLLSSYEK KEKPWSKEEI ELLRKAVVKF 480 PKGTSRRWEV VSDFIGTGRS VEEILKATKT VLLQKPDSSK AFDSFLEKRK PAPSIDSPLT 540 TRVEVEGVSS TLQDTENSAD KSAKAEDKSG ESSSGSAKEQ SPNDPNAANG VSSSSEQDVW 600 SAVQERALVQ ALKTFPKEAS QRWERVAAAV PGKSVNQCKK KFSLLKESFR NKKSSA

Sequence ? help Back to Top

Protein Sequence Length: 656 aa Download sequence

MGVESKLRLI TYSEEIVDGQ PIYVSSNGLP VKAVGKEPAG HSFHAVALKF RGWVEEVASA  60
AEPKAVDGKE QTSLPSFDSY SSSKGKKKSG GEGKQQDHYA LLGLSHLRYL ATEEQIRKSY  120
RETALKYHPD KQASLLLAEE SEAAKETKKD EIETHFKSIQ EAYEVLIDPV KRRIYDSTDE  180
FDDEIPTECA PQDFFKVFGP AFMRNGRWSV NQPIPFLGDE NTSLKEVDDF YNFWYTFKSW  240
REFPHEEEFD LEQAESRDHK RWMERQNAKL TEKARKEEYA RIRTLVDNAY KRDPRIVKRK  300
EAEKAEKQKK KQAKYLAKKL QEEEAARAAE EEKQRKEEEE KRAAEAASQQ KKLREKEKKL  360
LRKERSRLRT LSGPVISQRV LNLAEDDVES LCMSLNIEQL RNICDRMEGK EGVERAKVLR  420
GAHGGDNNDV EGKKEEEKKT PQQNGSVVSN GTVLLSSYEK KEKPWSKEEI ELLRKAVVKF  480
PKGTSRRWEV VSDFIGTGRS VEEILKATKT VLLQKPDSSK AFDSFLEKRK PAPSIDSPLT  540
TRVEVEGVSS TLQDTENSAD KSAKAEDKSG ESSSGSAKEQ SPNDPNAANG VSSSSEQDVW  600
SAVQERALVQ ALKTFPKEAS QRWERVAAAV PGKSVNQCKK KFSLLKESFR NKKSSA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11450.1	1e-131	MYB family protein