PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0011073.1_g000003.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 96aa MW: 11057.5 Da PI: 8.4873 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 28.3 | 5.8e-09 | 31 | 83 | 1 | 54 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrt 54 kfY +YA++v F vr+ + ++ +g++ r++ C+k+g++ + k + +e+++ Rmu_sc0011073.1_g000003.1 31 KFYTDYARRVVFFVRVMQRRRG-IDGRTLARRLGCNKQGFSPNPKGNLGREKKP 83 6****************98887.9999**************9999885555544 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 96 aa Download sequence |
MDLEEEEEEE VVAVDGSLEV NMGNSEGEAK KFYTDYARRV VFFVRVMQRR RGIDGRTLAR 60 RLGCNKQGFS PNPKGNLGRE KKPELVHEKV ATRQSW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G12850.2 | 4e-12 | FAR1 family protein |