PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0010963.1_g000005.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 231aa MW: 26713.1 Da PI: 10.5031 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 35.9 | 2.5e-11 | 174 | 230 | 1 | 60 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrt 60 +fY++Y+ ++GFsvr+ + +k+ n+ + + ++vCskeg++ +++ e ++ r trt Rmu_sc0010963.1_g000005.1 174 NFYCDYGARMGFSVRIMQRRKT--NNVVRQVNYVCSKEGFKLDSDPL-EVKKVDRLDTRT 230 6****************98888..889*************9998876.566666666665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MSPLRCHASP LHAAAILHRA TWPRCRQIQL PANYNNQNRN RYQTWPPFNH VRRITDRRNG 60 GVRSHHRKGP SSSYSTTTIV SDLRGTERDL SVQPKVEDPA IFPRPRLSLD TPPLLTISIP 120 SRAGMRRQRR RQEDDQEHSK TTDLGKDSMI VNRQASNNDD LYGLIVHSEE EAYNFYCDYG 180 ARMGFSVRIM QRRKTNNVVR QVNYVCSKEG FKLDSDPLEV KKVDRLDTRT G |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 126 | 131 | RRQRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G12850.2 | 2e-08 | FAR1 family protein |