PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0010880.1_g000002.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

MYB

Protein Properties

Length: 319aa MW: 36269.9 Da PI: 7.118

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0010880.1_g000002.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56	9.4e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l+++++ +G g+W+++++ g+ R++k+c++rw++yl Rmu_sc0010880.1_g000002.1 14 RGLWSPEEDEKLLRYITTYGHGCWRKVPEQAGLQRCGKSCRLRWLNYL 61 788*******************************************97 PP
2	Myb_DNA-binding	49.8	8.1e-16	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg +T++E++l+++++ G++ W+ Ia++++ gRt++++k++w+++ Rmu_sc0010880.1_g000002.1 67 RGVFTPDEEKLIIRLHGVVGNR-WAHIAKCLP-GRTDNEIKNYWNSW 111 899*****************.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 319 aa Download sequence
MGHHYCCKER KVKRGLWSPE EDEKLLRYIT TYGHGCWRKV PEQAGLQRCG KSCRLRWLNY 60 LRPDIKRGVF TPDEEKLIIR LHGVVGNRWA HIAKCLPGRT DNEIKNYWNS WIKKKLEKPS 120 SPMTTSADHH HQYSQMACLN PNNQDHIVNQ TFIARPSAYP LYMFEAASLD HDGTTRANNI 180 NINVHVDQHF PLNVNSNNLG ACILDRHNVQ PLPSTAPFTN MDANLLMPSL IGSTTTVNAN 240 MVEVESCSNI DEEGDISMEC LQSHQDLIAV VHSRQQQPCS NFHFCWDTVE EQHGGDEIAG 300 PLHRNTGANM MSSSLPSYL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G63910.1	1e-74	MYB family protein