PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0010342.1_g000003.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | ERF | ||||||||
Protein Properties | Length: 272aa MW: 29688 Da PI: 4.5732 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.1 | 1.4e-20 | 119 | 169 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr+++ +g+++AeIrdp++ng r++lg++ tae+Aa a+++a+ k++g Rmu_sc0010342.1_g000003.1 119 HFRGVRRRP-WGKYAAEIRDPKKNG--SRVWLGTYETAEDAALAYDQAAFKMRG 169 69*******.***********9998..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 272 aa Download sequence |
MFGEIDLESD FALLESIRQH LLDDNFDTTF DLEASSPTAS GSPPPIYCRS FSFGTLFSAE 60 NWSDLPLKVD SDSDDTVVSD AVPDEVTATP VKAEPQEVVE VLEESVAARE TQAPSSGRHF 120 RGVRRRPWGK YAAEIRDPKK NGSRVWLGTY ETAEDAALAY DQAAFKMRGS KAKLNFPHLI 180 GSEGSQPVRI TPKRRSPESY SSSSSSTSES GLPKPKRPNL GVGPAAAKAE FCGSIRAEMV 240 ETSQLAVVDQ RLNDFNTTVV SMPQEVMISG YE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44840.1 | 5e-36 | ERF family protein |