PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0008148.1_g000040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WOX | ||||||||
Protein Properties | Length: 259aa MW: 28144.7 Da PI: 4.3382 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 53.3 | 4.7e-17 | 47 | 107 | 3 | 57 |
--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+t+t++ql++L+ l++ +yp+ e+++e+ +l ++++++V++WFqN +a+e++ Rmu_sc0008148.1_g000040.1 47 NRWTPTPDQLRILKVLYYDkdLKYPTPEQIQEICLHLkpygQIEDKNVFFWFQNLKARERQ 107 8****************96579*************************************97 PP | |||||||
2 | Wus_type_Homeobox | 91.7 | 6.6e-30 | 45 | 108 | 2 | 64 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +++RWtPtp+Q++iL+ ly+ + l+ P+ e+iq+i +L+ yG+iedkNVf+WFQN kaRerqk Rmu_sc0008148.1_g000040.1 45 SNNRWTPTPDQLRILKVLYYdKDLKYPTPEQIQEICLHLKPYGQIEDKNVFFWFQNLKARERQK 108 679***************98799****************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MEPRTLQLME LQTQQQMELQ AQQPTEEGGS NQAAGSSANT PIRPSNNRWT PTPDQLRILK 60 VLYYDKDLKY PTPEQIQEIC LHLKPYGQIE DKNVFFWFQN LKARERQKLR LIQNVRVGGS 120 LDLNFGSTSS TDDGRSIDLN FGSTGSTGDD GSIDLTFGSS VDYNVDPYSS SPLNTNTSTT 180 SFGTTGGQTS MEQRGGDHQE VETLPLFPVH GENVLGNPKT TSEEGSAYGY YSGGSGGYNS 240 GSPVSLELSL NPSGAADLA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17950.1 | 4e-23 | WOX family protein |