PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0007609.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

FAR1

Protein Properties

Length: 526aa MW: 58955.3 Da PI: 6.1201

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0007609.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	60.9	3.8e-19	94	183	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtklel 83 +Y+ YA+ +GF +r ++ ++ g+it+r++vC+kegkre + + +++ r+ ++etr++C a ++ +k ++++ +t++++ Rmu_sc0007609.1_g000001.1 94 WYRMYATALGFMTRLQRVTRG-IGGRITRRRLVCNKEGKREAKWLQkEDRVRNAKQETRCNCLAACCIHFNKnSQTYIITEFKT 176 7*************99997.9999**********9987663567788999**9999999888899***** PP FAR1 84 eHnHela 90 eHnH+la Rmu_sc0007609.1_g000001.1 177 EHNHDLA 183 **996 PP

Sequence ? help Back to Top
Protein Sequence Length: 526 aa Download sequence
MLNLLTSIFD FQIGFSDILV YPSMNFEHPS SSDCRYTEVQ SADQDSAEPP QEERVSYGDE 60 NFTAKSCVGK SFAELTAEDV EGREFATLDD AENWYRMYAT ALGFMTRLQR VTRGIGGRIT 120 RRRLVCNKEG KREAKWLQKE DRVRNAKQET RCNCLAACCI HFNKNSQTYI ITEFKTEHNH 180 DLAMHSNGSV THADMGHLGA RRICSVSTSR ADDYTVKCNG GFEFVGDTEK DLFNKIEAEP 240 RAKLFKQGEE TAPIVEVSDI TMPPWSINLV GFGDEYRCDH VDIPQGVTYS YVSLSPHVKA 300 IASLTSIATE QSLKARDEIL RLKRDSELAL KAKEAEAAVL KRELAECQRE LELVKSADKY 360 RYRTIEEVGG NSKKQITEDN SNRGQSPEGG ADIQLLCSLG GWKSGFAPDK DMEFDSTYHL 420 QPHNFAVICP SGTIPFSPAN AGRGSDLVLL AGAAWPFQKY HRMESASDNV DRSPIFRYVY 480 VSETRANLSR EIQRRQEGRP RLAVFAPPLL MLSNVLVLTN AAVNSC

Sequence ? help Back to Top

Protein Sequence Length: 526 aa Download sequence

MLNLLTSIFD FQIGFSDILV YPSMNFEHPS SSDCRYTEVQ SADQDSAEPP QEERVSYGDE  60
NFTAKSCVGK SFAELTAEDV EGREFATLDD AENWYRMYAT ALGFMTRLQR VTRGIGGRIT  120
RRRLVCNKEG KREAKWLQKE DRVRNAKQET RCNCLAACCI HFNKNSQTYI ITEFKTEHNH  180
DLAMHSNGSV THADMGHLGA RRICSVSTSR ADDYTVKCNG GFEFVGDTEK DLFNKIEAEP  240
RAKLFKQGEE TAPIVEVSDI TMPPWSINLV GFGDEYRCDH VDIPQGVTYS YVSLSPHVKA  300
IASLTSIATE QSLKARDEIL RLKRDSELAL KAKEAEAAVL KRELAECQRE LELVKSADKY  360
RYRTIEEVGG NSKKQITEDN SNRGQSPEGG ADIQLLCSLG GWKSGFAPDK DMEFDSTYHL  420
QPHNFAVICP SGTIPFSPAN AGRGSDLVLL AGAAWPFQKY HRMESASDNV DRSPIFRYVY  480
VSETRANLSR EIQRRQEGRP RLAVFAPPLL MLSNVLVLTN AAVNSC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	1e-11	FAR1 family protein