PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0007537.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WOX | ||||||||
Protein Properties | Length: 212aa MW: 23791.4 Da PI: 4.525 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 43.4 | 5.9e-14 | 47 | 107 | 3 | 57 |
--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 R+t+t++ql++L+el++ r + e+++e+ l +++ ++V++WFqN +a+e++ Rmu_sc0007537.1_g000001.1 47 YRWTPTPDQLRILQELYYDkvLRSSTPEQIQEICLYLqqygQIEGKNVFFWFQNLKARERQ 107 6****************965799************************************97 PP | |||||||
2 | Wus_type_Homeobox | 90.9 | 1.3e-29 | 46 | 108 | 3 | 64 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 + RWtPtp+Q++iL+ely+ + lr+ + e+iq+i L++yG+ie+kNVf+WFQN kaRerqk Rmu_sc0007537.1_g000001.1 46 NYRWTPTPDQLRILQELYYdKVLRSSTPEQIQEICLYLQQYGQIEGKNVFFWFQNLKARERQK 108 68***************987889***************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
MEPRTLQLME LETQQQMELQ AQQPTEEGGS IQAAGSSANK PIRPTNYRWT PTPDQLRILQ 60 ELYYDKVLRS STPEQIQEIC LYLQQYGQIE GKNVFFWFQN LKARERQKLR EYRNVPVGGS 120 LDLNFGSTSS TSTDRSIDLN FGSRVGYGAD GSIMEQRGEY HQEIETLPLF SMHGEDILGN 180 MKTTSEGGGG YGGGSRISLE LSLNSYGDAD MA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17950.1 | 6e-26 | WOX family protein |