PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0007475.1_g000011.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

FAR1

Protein Properties

Length: 701aa MW: 80774.5 Da PI: 8.5819

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0007475.1_g000011.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	70.1	5.2e-22	92	175	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtklele 84 ++Yn YAkevGF+vr+++s +++++e + + ++Cs +g+++ ++ + r r+etrtgC a+l++++ ++++w+v ++ le Rmu_sc0007475.1_g000011.1 92 NYYNCYAKEVGFRVRVKNSWFKRNSKEKYGAVLCCSSQGFKRIKDVN-----RLRKETRTGCPAMLRMRLVDSKRWRVLEVALE 170 69***************************************9988.....99************************** PP FAR1 85 HnHel 89 HnH l Rmu_sc0007475.1_g000011.1 171 HNHLL 175 *87 PP

Sequence ? help Back to Top
Protein Sequence Length: 701 aa Download sequence
MLGLLKYRTN QRTSSAGQTL SFRSYPSSHR ILLVSEIVRF LNLKDPDCNE IATDGDGVLT 60 ELDAENRVPE GKKEFVAPAI GMEFESYEDA YNYYNCYAKE VGFRVRVKNS WFKRNSKEKY 120 GAVLCCSSQG FKRIKDVNRL RKETRTGCPA MLRMRLVDSK RWRVLEVALE HNHLLGTKIY 180 KSMKKMGSGT KRKSQSSSDA EKRTIKLYRA LVIDSGGNGP SNSNATEARN DIPNQLNLKK 240 GDTQAIYNYL CRMQLTNPNF FYLMDINDDG RLRNVFWIDA RSRAACGYFC DVIYIDNTYL 300 ANKFEIPLVA LVGINHHGQA VLLGCALLAG ETAESYIWLF KAWLTCVSGH SPQTIITDRC 360 NVLQSAVAEV FPSCHHRFGL SLIIKKVPEK LGGSRNYDAI RKTLLKAVYE SLKVIEFEAA 420 WGFMIQHFGV SDHEWLRSLY EDRFRWAPVY LKETSFAGMS AAHPGETLSP FFDKYVHKQT 480 PLKEFLDKYE LALQKKHKEE ALADIESRSS SPMLKTRCSF ELQLSKVYTK EIFKKFQFEV 540 EEMYSCFSTT QLHIDGPIVI FLVKERVVAD GNRREIRDYE VLYNRTAGEV RCICSCFNFH 600 GYLCRHALCV LNFNGVEEIP SKYILSRWKK DYKRLYIPDH GSNNVDVTDR MQWFSQLYRS 660 ALQIVEEGVI SLDHYNVALQ AFEESLKRVH EIEDKHEPEN L

Sequence ? help Back to Top

Protein Sequence Length: 701 aa Download sequence

MLGLLKYRTN QRTSSAGQTL SFRSYPSSHR ILLVSEIVRF LNLKDPDCNE IATDGDGVLT  60
ELDAENRVPE GKKEFVAPAI GMEFESYEDA YNYYNCYAKE VGFRVRVKNS WFKRNSKEKY  120
GAVLCCSSQG FKRIKDVNRL RKETRTGCPA MLRMRLVDSK RWRVLEVALE HNHLLGTKIY  180
KSMKKMGSGT KRKSQSSSDA EKRTIKLYRA LVIDSGGNGP SNSNATEARN DIPNQLNLKK  240
GDTQAIYNYL CRMQLTNPNF FYLMDINDDG RLRNVFWIDA RSRAACGYFC DVIYIDNTYL  300
ANKFEIPLVA LVGINHHGQA VLLGCALLAG ETAESYIWLF KAWLTCVSGH SPQTIITDRC  360
NVLQSAVAEV FPSCHHRFGL SLIIKKVPEK LGGSRNYDAI RKTLLKAVYE SLKVIEFEAA  420
WGFMIQHFGV SDHEWLRSLY EDRFRWAPVY LKETSFAGMS AAHPGETLSP FFDKYVHKQT  480
PLKEFLDKYE LALQKKHKEE ALADIESRSS SPMLKTRCSF ELQLSKVYTK EIFKKFQFEV  540
EEMYSCFSTT QLHIDGPIVI FLVKERVVAD GNRREIRDYE VLYNRTAGEV RCICSCFNFH  600
GYLCRHALCV LNFNGVEEIP SKYILSRWKK DYKRLYIPDH GSNNVDVTDR MQWFSQLYRS  660
ALQIVEEGVI SLDHYNVALQ AFEESLKRVH EIEDKHEPEN L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	0.0	FAR1 family protein