PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0007177.1_g000007.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | NAC | ||||||||
Protein Properties | Length: 133aa MW: 15376.9 Da PI: 9.3484 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 33.6 | 1.2e-10 | 12 | 81 | 52 | 123 |
NAM 52 kaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvm 123 ++ee+ +yfF++r+k +++ k+ r++ sg+W+a+ +++ v + ++++vg+k+ + + g +p+ ++ W++ Rmu_sc0007177.1_g000007.1 12 EEEEQPLYFFTHRKKLNPKAKKFDRKVGSGTWSAQYSKNVVAA-DDSVVGIKREFRYEGGFDPH-QNGAWLL 81 3345577***************************998666666.999**********9888887.7888875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 133 aa Download sequence |
MFHAQSISIM KEEEEQPLYF FTHRKKLNPK AKKFDRKVGS GTWSAQYSKN VVAADDSVVG 60 IKREFRYEGG FDPHQNGAWL LLMIVLLFPY YCLNFFWSND QKPTVHLLQT VTSPESYMQG 120 LATLVVIVKI MPL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62380.1 | 2e-06 | NAC family protein |